Southall Lab
Selected publications:
NuRD-independent Mi-2 activity represses ectopic gene expression during neuronal maturation.
Aughey GN, Forsberg E, Grimes K, Zhang S, Southall TD.
EMBO Rep. 2023 Feb 1:e55362. doi: 10.15252/embr.202255362. PMID: 36722816
An auxin-inducible, GAL4-compatible, gene expression system for Drosophila
McClure CD, Hassan A, Aughey GN, Butt K, Estacio-Gómez A, Duggal A, Ying Sia C, Barber AF, Southall TD.
Elife. 2022 Apr 1;11:e67598. doi: 10.7554/eLife.67598.
Decoding gene regulation in the fly brain
Janssens, J., Aibar, S., Taskiran, I., Spanier, K., González-Blas, C.B., Quan, X.J., Ismail, J., Papasokrati, D., Hulselmans, G., Makhzami, S., De Waegeneer, M., Christiaens, V., De Rop, F., Estacio Gomez, A., Aughey, G.N., Dionne, M., Grimes, K., Southall, T.D., Aerts, S. (2022). Nature. https://doi.org/10.1038/s41586-021-04262-z
Gene expression profiling of epidermal cell types in C. elegans using Targeted-DamID
Katsanos, D, Ferrando-Marco, M, Razzaq, I, Aughey, GN, Southall, TD, Barkoulas, M. (2021) Development. doi: 10.1242/dev.199452
Dynamic adult tracheal plasticity drives stem cell adaptation to changes in intestinal homeostasis in Drosophila
Perochon J, Yu Y, Aughey GN, Medina AB, Southall TD, Cordero JB.
Nat Cell Biol. 2021 May;23(5):485-496. doi: 10.1038/s41556-021-00676-z. Epub 2021 May 10.
FlyORF-TaDa allows rapid generation of new lines for in vivo cell-type specific profiling of protein-DNA interactions in Drosophila melanogaster
Aughey GN, Delandre C, McMullen JPD, Southall TD*, Marshall, OJ*
G3 (Bethesda). 2021 Jan 18;11(1):jkaa005. doi: 10.1093/g3journal/jkaa005.
Estacio-Gómez, A., Hassan, A., Walmsley, E.L., Le, L.W. and Southall, T.D.
Biology Open 2020 9: bio052928 doi: 10.1242/bio.052928
Hassan A, Araguas Rodriguez P, Heidmann SK, Walmsley EL, Aughey GN, Southall TD.
Elife. 2020 Apr 7;9:e55159. doi: 10.7554/eLife.55159. Online ahead of print. PMID: 32255428
Ets21c Governs Tissue Renewal, Stress Tolerance, and Aging in the Drosophila Intestine.
Mundorf J, Donohoe CD, McClure CD, Southall TD, Uhlirova M.
Cell Rep. 2019 Jun 4;27(10):3019-3033.e5. doi: 10.1016/j.celrep.2019.05.025.PMID: 31167145
fs(1)h controls metabolic and immune function and enhances survival via AKT and FOXO in Drosophila.
Sharrock J, Estacio-Gomez A, Jacobson J, Kierdorf K, Southall TD, Dionne MS.
Dis Model Mech. 2019 Apr 4;12(4):dmm037259. doi: 10.1242/dmm.037259.PMID: 30910908
Sen SQ, Chanchani S, Southall TD, Doe CQ.
Elife. 2019 Jan 29;8:e44036. doi: 10.7554/eLife.44036.PMID: 30694180
Aughey GN, Estacio Gomez A, Thomson J, Yin H, Southall TD.
Elife. 2018 Feb 26;7:e32341. doi: 10.7554/eLife.32341.PMID: 29481322
Dinges N, Morin V, Kreim N, Southall TD, Roignant JY.Cell Rep. 2017 Dec 5;21(10):2911-2925. doi: 10.1016/j.celrep.2017.11.015.PMID: 29212035
Marshall OJ, Southall TD, Cheetham SW, Brand AH.Nat Protoc. 2016 Sep;11(9):1586-98. doi: 10.1038/nprot.2016.084. Epub 2016 Aug 4.PMID: 27490632
Dedifferentiation of neurons precedes tumor formation in Lola mutants.
Southall TD, Davidson CM, Miller C, Carr A, Brand AH.
Dev Cell. 2014 Mar 31;28(6):685-96. doi: 10.1016/j.devcel.2014.01.030. Epub 2014 Mar 13.PMID: 24631403
Southall TD, Gold KS, Egger B, Davidson CM, Caygill EE, Marshall OJ, Brand AH.
Review Articles:
DamID as a versatile tool for understanding gene regulation.
Aughey GN, Cheetham SW, Southall TD.
Development. 2019 Mar 15;146(6):dev173666. doi: 10.1242/dev.173666.PMID: 30877125 Review.
Dam it's good! DamID profiling of protein-DNA interactions.
Aughey GN, Southall TD.
Wiley Interdiscip Rev Dev Biol. 2016 Jan-Feb;5(1):25-37. doi: 10.1002/wdev.205. Epub 2015 Sep 18.PMID: 26383089 Review.
McClure CD, Southall TD.
Adv Genet. 2015;91:103-151. doi: 10.1016/bs.adgen.2015.06.003. Epub 2015 Jul 23.PMID: 26410031 Review.