
Southall Lab
Selected publications:
Decoding gene regulation in the fly brain
Janssens, J., Aibar, S., Taskiran, I., Spanier, K., González-Blas, C.B., Quan, X.J., Ismail, J., Papasokrati, D., Hulselmans, G., Makhzami, S., De Waegeneer, M., Christiaens, V., De Rop, F., Estacio Gomez, A., Aughey, G.N., Dionne, M., Grimes, K., Southall, T.D., Aerts, S. (2022). Nature. https://doi.org/10.1038/s41586-021-04262-z
Gene expression profiling of epidermal cell types in C. elegans using Targeted-DamID
Katsanos, D, Ferrando-Marco, M, Razzaq, I, Aughey, GN, Southall, TD, Barkoulas, M. (2021) Development. doi: 10.1242/dev.199452
FlyORF-TaDa allows rapid generation of new lines for in vivo cell-type specific profiling of protein-DNA interactions in Drosophila melanogaster
Aughey GN, Delandre C, McMullen JPD, Southall TD*, Marshall, OJ*
G3 (Bethesda). 2021 Jan 18;11(1):jkaa005. doi: 10.1093/g3journal/jkaa005.
Estacio-Gómez, A., Hassan, A., Walmsley, E.L., Le, L.W. and Southall, T.D.
Biology Open 2020 9: bio052928 doi: 10.1242/bio.052928
Hassan A, Araguas Rodriguez P, Heidmann SK, Walmsley EL, Aughey GN, Southall TD.
Elife. 2020 Apr 7;9:e55159. doi: 10.7554/eLife.55159. Online ahead of print. PMID: 32255428
Ets21c Governs Tissue Renewal, Stress Tolerance, and Aging in the Drosophila Intestine.
Mundorf J, Donohoe CD, McClure CD, Southall TD, Uhlirova M.
Cell Rep. 2019 Jun 4;27(10):3019-3033.e5. doi: 10.1016/j.celrep.2019.05.025.PMID: 31167145
fs(1)h controls metabolic and immune function and enhances survival via AKT and FOXO in Drosophila.
Sharrock J, Estacio-Gomez A, Jacobson J, Kierdorf K, Southall TD, Dionne MS.
Dis Model Mech. 2019 Apr 4;12(4):dmm037259. doi: 10.1242/dmm.037259.PMID: 30910908
Sen SQ, Chanchani S, Southall TD, Doe CQ.
Elife. 2019 Jan 29;8:e44036. doi: 10.7554/eLife.44036.PMID: 30694180
Aughey GN, Estacio Gomez A, Thomson J, Yin H, Southall TD.
Elife. 2018 Feb 26;7:e32341. doi: 10.7554/eLife.32341.PMID: 29481322
Dinges N, Morin V, Kreim N, Southall TD, Roignant JY.Cell Rep. 2017 Dec 5;21(10):2911-2925. doi: 10.1016/j.celrep.2017.11.015.PMID: 29212035
Marshall OJ, Southall TD, Cheetham SW, Brand AH.Nat Protoc. 2016 Sep;11(9):1586-98. doi: 10.1038/nprot.2016.084. Epub 2016 Aug 4.PMID: 27490632
Dedifferentiation of neurons precedes tumor formation in Lola mutants.
Southall TD, Davidson CM, Miller C, Carr A, Brand AH.
Dev Cell. 2014 Mar 31;28(6):685-96. doi: 10.1016/j.devcel.2014.01.030. Epub 2014 Mar 13.PMID: 24631403
Southall TD, Gold KS, Egger B, Davidson CM, Caygill EE, Marshall OJ, Brand AH.
Review Articles:
DamID as a versatile tool for understanding gene regulation.
Aughey GN, Cheetham SW, Southall TD.
Development. 2019 Mar 15;146(6):dev173666. doi: 10.1242/dev.173666.PMID: 30877125 Review.
Dam it's good! DamID profiling of protein-DNA interactions.
Aughey GN, Southall TD.
Wiley Interdiscip Rev Dev Biol. 2016 Jan-Feb;5(1):25-37. doi: 10.1002/wdev.205. Epub 2015 Sep 18.PMID: 26383089 Review.
McClure CD, Southall TD.
Adv Genet. 2015;91:103-151. doi: 10.1016/bs.adgen.2015.06.003. Epub 2015 Jul 23.PMID: 26410031 Review.